Pia Löthgren Distance Metrics for Stochastic Shape Models Abstract The purpose of this exam project is to develop mathematical and statistical models that can be used to build stochastic models of the shapes of a beating heart. This could then be used to construct a decision support system to help with diagnosis of patients with suspected cardiac infarction. In order to establish correspondence between different shapes one needs to find a suitable reparametrisations for each shape. The current most popular methods for doing so, the Minimal Description Length methods, have problems with gathering of sample points. We propose that this problem is because the methods are based on the Euclidian metric on arbitrary sample points. We propose a new distance metric that is weighted by surface area and by the Laplacian of the surface. This new metric is invariant to any reparametrisation of the surfaces. It can also bed used to build plausible probability structures for the set of objects on which the metric is defined. The models of the shapes in this metric can be used independently of any particular measurement method.